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News
Sanmay Das joins the Computer Science Dept.
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Select Publications2008 Benjarath Phoophakdee and Mohammed J. Zaki, TRELLIS+: An Effective Approach for Indexing Genome-Scale Sequences using Suffix Trees, 13th Pacific Symposium on Biocomputing (PSB), Hawaii, January 2008. 2007Sanmay Das, Milton H. Saier, Jr. and Charles Elkan, Finding Transport Proteins in a General Protein Database, Principles and Practice of Knowledge Discovery in Databases (Proc. PKDD 2007), September 2007. Sanmay Das. Learning to Trade with Insider
Information, Ninth International Conference on E-Commerce (Proc.
ICEC 2007), August 2007. Haralampos-G. D. Stratigopoulos, Petros Drineas, Mustapha Slamani, Yiorgos Makris, Non-RF to RF Test Correlation Using Learning Machines: A Case Study, VTS 2007: 9-14 Hung-Ching (Justin) Chen, Mark Goldberg, Malik Magdon-Ismail, William A. Wallace, Reverse Engineering an Agent-Based Hidden Markov Model for Complex Social Systems, Proc. International Conference on Intelligent Data Engineering and Automated Learning (IDEAL), December 16-19, Birmingham, UK, 2007 Hung-Ching (Justin) Chen, Mark Goldberg, Malik Magdon-Ismail, William A. Wallace, Inferring Agent Dynamics from Social Communication Network, ACM Workshop on Web Mining and Web Usage Analysis (SIG KDD'07), San Jose, CA, August 12-15. J. Baumes, Mark Goldberg, M. Hayvanovych, S. Kelley, M. Magdon-Ismail, K. Mertsalov, W. Wallace, SIGHTS: A Software System for Finding Coalitions and Leaders in a Social Network, IEEE International Conference on Intelligence and Security Informatics (ISI 2007); New Brunswick, May 23-24, pp.193-199, 2007. J. Baumes, Mark Goldberg, M. Magdon-Ismail, W. Wallace, Identification of Hidden Groups in Communications, chapter in Handbooks in Information Systems, Volume 2: National Security, 2007, Elsevier. Mark K.Goldberg, Clusters in a multigraph with elevated density, The Electronic Journal of Combinatorics, Volume 14(1), R10, 2007. Yingjie Zhou, Mark Goldberg, Malik Magdon-Ismail and Al Wallace, Strategies for Cleaning Organizational Emails with an Application to Enron Email Dataset, 5th Conf. of North American Association for Computational Social and Organizational Science (NAACSOS 07), Emory - Atlanta, Georgia, June 7-9, 2007. Costas Busch, Malik Magdon-Ismail, Marios Mavronicolas, Efficient bufferless packet switching on trees and leveled networks,J. Parallel Distrib. Comput. 67(11): 1168-1186. Bülent Yener, Malik Magdon-Ismail, Fikret Sivrikaya, Joint problem of power optimal connectivity and coverage in wireless sensor networks , Wireless Networks 13(4): 537-550. Hung-Ching (Justin) Chen, Mark Goldberg, Malik Magdon-Ismail and Al Wallace, Discover The Power of Social and Hidden Curriculum to Decision Making: Experiments with Enron Email and Movie Newsgroups, Proc. International Conference on Machine Learning and Applications (ICMLA), December 13-15, 2007, Cincinnati, Ohio, 2007. Travis Desell, Nathan Cole, Malik Magdon-Ismail, Heidi Newberg, Bolek Szymanski, Carlos Varela, Distributed and Generic Maximum Likelihood Evaluation, Proc. 3rd International Conference on e-science and Grid Computing,, pp , Bangalore, India, Dec 10-13, 2007. Hung-Ching (Justin) Chen, Mark Goldberg, Malik Magdon-Ismail and Al Wallace, Learning What Makes a Society Tick, Proc. Worksop on Optimization-based Data Mining Techniques with Applications at the Seventh IEEE International Conference on Data Mining (ICDM), October 28-31, Omaha, Nebraska, 2007. Fikret Sivrikaya, Costas Busch, Malik Magdon-Ismail, Bulent Yener, ASAND: Asynchronous Slot Assignment and Neighbor Discovery Protocol for Wireless Networks, OPNETWORK 2007, August 27-31,2007, Washington DC. Zujun Shentu, Mohammad Al Hasan, Christopher Bystroff and Mohammed J. Zaki, Context Shapes: Efficient Complementary Shape Matching for Protein-Protein Docking, in Proteins: Structure, Function and Bioinformatics, 2007 (forthcoming). Mohammed J. Zaki, Markus Peters, Ira Assent, Thomas Seidl, CLICKS: An Effective Algorithm for Mining Subspace Clusters in Categorical Datasets, in Data and Knowledge Engineering special issue on Intelligent Data Mining, Fernando Berzal and Juan Carlos Cubero (eds.), Vol. 60, Issue 1, pp. 51-70, January 2007. Mohammed J. Zaki, Akifumi Makinouchi, Shunsuke Uemura, Editorial: special issue on Biomedical Data Engineering, in International Journal of Bioinformatics Research and Applications, Volume 3, No. 1, pp 1-3, 2007. Mohammad Hasan, Vineet Chaoji, Saeed Salem, jeremy Besson, and Mohammed J. Zaki, ORIGAMI: Mining Representative Orthogonal Graph Patterns, 7th IEEE International Conference on Data Mining, Omaha, NE, October 2007. Karam Gouda, Mosab Hassaan, and Mohammed J. Zaki, PRISM: A Prime-Encoding Approach for Frequent Sequence Mining, 7th IEEE International Conference on Data Mining, Omaha, NE, October 2007. Adriano Veloso, Wagner Meira, Jr, Marcos Golcalves and Mohammed J. Zaki, Multi-Label Lazy Associative Classification , 11th European Conference on Principles and Practice of Knowledge Discovery, (PKDD), Warsaw, Poland, September 2007. Charu A. Aggarwal, Na Ta, Jianyong Wang, Jianhua Feng, Mohammed J. Zaki, XProj: A Framework for Projected Structural Clustering of XML Documents, 13th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, San Diego, CA, August 2007. Benjarath Phoophakdee and Mohammed J. Zaki, Genome-scale Disk-based Suffix Tree Indexing, ACM SIGMOD International Conference on Management of Data, Beijing, China, June 2007. 2006 K. P. Bennett, J. Hu, G. Kunapuli, and J.-S. Pang, Model Selection via Bilevel Optimization, International Joint Conference in Neural Networks, Vancouer 2006. Inna Vitol, Jeffrey Driscoll, Barry Kreiswirth, Natalia Kurepina, Kristin P. Bennett, Identifying Mycobacterium tuberculosis Complex Strain Families using Spoligotypes, Infection, Genetics, and Evolution, Nov, 6(6), 491-504, 2006. Petros Drineas, Michael W. Mahoney, S. Muthukrishnan, Subspace Sampling and Relative-Error Matrix Approximation: Column-Based Methods, APPROX-RANDOM 2006, 316-326. Petros Drineas, Michael W. Mahoney, S. Muthukrishnan, Subspace Sampling and Relative-Error Matrix Approximation: Column-Row-Based Methods, ESA 2006, 304-314. Michael W. Mahoney, Mauro Maggioni, Petros Drineas, Tensor-CUR decompositions for tensor-based data, KDD 2006, 327-336. Petros Drineas, Michael W. Mahoney, S. Muthukrishnan, Sampling algorithms for l2 regression and applications, SODA 2006, 1127-1136. Petros Drineas, Michael W. Mahoney, Randomized Algorithms for Matrices and Massive Data Sets, VLDB 2006, 1269. Sobeeh Almukhaizim, Petros Drineas, Yiorgos Makris, Entropy-driven parity-tree selection for low-overhead concurrent error detection in finite state machines, IEEE Trans. on CAD of Integrated Circuits and Systems 25(8), 1547-1554 (2006). Petros Drineas, Ravi Kannan, Michael W. Mahoney, Fast Monte Carlo Algorithms for Matrices I: Approximating Matrix Multiplication, SIAM J. Comput. 36(1), 132-157 (2006). Petros Drineas, Ravi Kannan, Michael W. Mahoney, Fast Monte Carlo Algorithms for Matrices II: Computing a Low-Rank Approximation to a Matrix, SIAM J. Comput. 36(1), 158-183 (2006). Petros Drineas, Ravi Kannan, Michael W. Mahoney, Fast Monte Carlo Algorithms for Matrices III: Computing a Compressed Approximate Matrix Decomposition, SIAM J. Comput. 36(1), 184-206 (2006). J. Baumes, Mark Goldberg, H.-C. Chen, M. Francisco, M. Magdon-Ismail, W. Wallace, Social Capital Experiments, 4th Conf. of North American Association for Computational Social and Organizational Science (NAACSOS 06), Notre-Dame, Indiana, June 22 - 23, 2006.
Matthew Francisco, Jeffery Baumes, Hung-Ching Chen, Mark Goldberg, Malik Magdon-Ismail and Al Wallace, Using Agent-Based Modeling to Traverse Frameworks in Theories of the Social, International Conference on Complex Systems (ICCS06), Boston, MA, June 25-30, 2006. E. J. Griffith, S. Akella, Mark Goldberg, Performance Characterization of a Reconfigurable Planar Array Digital Muicrofludic System, IEEE Transactions on Computer-Aided Design of Integrated Circuits and Sustems, Special Issue on Design Automation Methods and Tools for Microfluidic-Based Biochips, Vol. 25, N o. 2, pp. 340-352, Feb. 2006. Costas Busch, Malik Magdon-Ismail, Atomic Routing Games on Maximum Congestion, AAIM 2006, 79-91. Ali Civril, Malik Magdon-Ismail, Eli Bocek-Rivele, SSDE: Fast Graph Drawing Using Sampled Spectral Distance Embedding. Graph Drawing 2006, 30-41. Sibel Adali, Brandeis Hill, Malik Magdon-Ismail, The Impact of Ranker Quality on Rank Aggregation Algorithms: Information vs. Robustness , ICDE Workshops 2006, 37. Hung-Ching Chen, Malik Magdon-Ismail: NN-OPT, Neural Network for Option Pricing Using Multinomial Tree, ICONIP (3), 2006, 360-369. Hung-Ching Chen, Malik Magdon-Ismail, Learning Martingale Measures From High Frequency Financial Data to Help Option Pricing, JCIS 2006. Costas Busch, Malik Magdon-Ismail, Marios Mavronicolas, Paul G. Spirakis, Direct Routing: Algorithms and Complexity, Algorithmica 45(1), 45-68 (2006). Victor Boyarshinov, Malik Magdon-Ismail, Linear time isotonic and unimodal regression in the L1 and Linfinity norms, J. Discrete Algorithms 4(4), 676-691 (2006). Jeffery Baumes, Hung-Ching Chen, Matthew Francisco, Mark Goldberg, Malik Magdon-Ismail and Al Wallace, Modeling the Cultural Subjectivity: Towards Computational Critique, 4th Conf. of North American Association for Computational Social and Organizational Science (NAACSOS 06), Notre-Dame, Indiana, June 22-23, 2006. Petros Drineas, Asif Javed, Malik Magdon-Ismail, Gopal Pandurangan, Reino Virrankoski, Andreas Savvides, Distance Matrix Reconstruction from Incomplete Distance Information for Sensor Network Localization, Third Annual IEEE Communications Society Conference on Sensor, Mesh and Ad Hoc Communications and Networks (IEEE SECON06), Sep. 25-28, Reston, VA, USA. Yongqiang Zhang, Mohammed J. Zaki, sMOTIF: Efficient structured pattern and profile motif search, in Algorithms for Molecular Biology, Vol. 1, 22, November 2006. Yongqiang Zhang, Mohammed J. Zaki, ExMOTIF: Efficient Structured Motif Extraction , in Algorithms for Molecular Biology, Vol. 1, 21, November 2006. Mohammed J. Zaki, Charu C. Aggarwal, XRules: An Effective Structural Classifier for XML Data, in Machine Learning Journal special issue on Statistical Relational Learning and Multi-Relational Data Mining , Hendrik Blockeel, David Jensen, Stefan Kramer (eds.), Vol. 62, No. 1-2, pp. 137-170, Feb. 2006. Adriano Veloso, Wagner Meira Jr, and Mohammed J. Zaki, Lazy Associative Classification , 6th IEEE International Conference on Data Mining , Hong Kong, December 2006. Adriano Veloso, Wagner Meira, Jr, Marco Cristo, Marcos Golcalves and Mohammed J. Zaki, Multi-Evidence, Multi-Criteria, Lazy Associative Document Classification , 15th ACM Conference on Information and Knowledge Management, Arlington, VA, November 2006. Bouchra Bouqata, Christopher D. Carothers, Boleslaw K. Szymanski and Mohammed J. Zaki, VOGUE: A Novel Variable Order-Gap State Machine for Modeling Sequences , 10th European Conference on Principles and Practice of Knowledge Discovery (PKDD), Berlin, Germany, September 2006. Lizhuang Zhao, Mohammed J. Zaki and Naren Ramakrishnan, BLOSOM: A Framework for Mining Arbitrary Boolean Expressions, 12th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining , Philadelphia, PA, August 2006. Yongqiang Zhang and Mohammed J. Zaki, ExMotif: Efficient Structured Motif Extraction, 6th SIGKDD Workshop on Data Mining in Bioinformatics , Philadelphia, PA, August 2006. Mohammad Hasan, Vineet Chaoji, Saeed Salem, Mohammed J. Zaki, Link Prediction using Supervised Learning, Workshop on Link Analysis , Counter-terrorism and Security (with SIAM Data Mining Conference), Bethesda, MD, April 2006.
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