Proteomics Reveals Multiple Routes to the Osteogenic Phenotype Mesenchymal Stem Cells. in  with K. P. Bennett, C.  Bergeron, E.  Acar, R. F. Klees, S. L. Vandenberg,  G. E Plopper. In Biomedical Central (BMC) Genomics.

Unsupervised Multiway data Analysis: A Literature Survey. with E. Acar. In press: IEEE Transactions on Knowledge and Data Engineering.

Multiway Analysis of Epilepsy Tensors. with E. Acar, C. Aykut-Bingol, H. Bingol. R. Bro.  in BIOINFORMATICS 23(13): i10-i18, 2007.

Seizure Recognition on Epilepsy Feature Tensor. with E. Acar, C. Aykut-Bingol, H. Bingol. R. Bro.  in Proc.  of  IEEE EMNBC 2007, August 2007.

Cell-Graph Mining for Breast Tissue Modeling and Analysis. with C. Bilgin, C. Demir, C. Nagi. in Proc. of IEEE EMBC 2007, August 2007.

Computational Analysis of Epileptic Focus Localization. with E. Acar, C. Bingol, H. Bingol.
in Proceedings of The Fourth IASTED International Conference on Biomedical Engineering - BioMED2006, 15-17 February 2006, Innsbruck, Austria.

Learning the Topological Properties of Brain Tumors. with C. Gunduz and S. H. Gultekin.
in IEEE/ACM Transactions on Computational Biology and Bioinformatics Vol2. No. 3, July-September 2005.

Augmented Cell-graphs for Automated Cancer Diagnosis. with C. Demir and S. H. Gultekin.
in BIOINFORMATICS Vol. 21 Suppl. 2 2005 pp 7--12. (Presented in Proc. of ECCB, October 2005).

Spectral Analysis of Cell-graphs for Automated Cancer Diagnosis. with C. Demir and S. H. Gultekin. in Proc. of 4th Conference on Modeling and Simulation in Biology, Medicine and Biomedical Engineering, Linkoping, Sweden, May 2005.

The Cell-Graphs of Cancer. with C. Gunduz and S. H. Gultekin. in BIOINFORMATICS Vol. 20 Suppl. 2004, pp 145-151 (presented in Proc. of International Symposium on Molecular Biology ISMB/ECCB, July, 2004).