4th Workshop on Data Mining in Bioinformatics
August 22nd, 2004
Seattle, WA, USA
in conjunction with
10th ACM SIGKDD International Conference on Knowledge
Discovery and Data Mining
(SIGKDD'2004)
Proceedings of the 4th ACM SIGKDD
Workshop on Data Mining in Bioinformatics edited by Mohammed
J. Zaki, Shinichi Morishita, and Isidore Rigoutsos
(Click Here for PDF)
See original Call for Papers
for topics of interest.
8:50-9:00 Opening
Remarks
9:00-10:00 Session I (Chair: Anne Denton)
10:00-10:30 Coffee Break
10:30-11:15 Keynote Talk (Chair: Isidore Rigoutsos)
- Mark Boguski, M.D, Ph.D., Senior Director,
Development and Research, Allen Institute for Brain Science; and
affiliate faculty, Fred Hutchinson Cancer
Research Center and Department of
Medicine/Genetics, University of
Washington.
10:30-12:00
Session II (Chair: Isidore Rigoutsos)
12:00-1:30 Lunch
1:30-3:10 Session III (Chair: Mohammed Zaki)
- 1:30-2:00 (long) Meta-classification of Multi-type
Cancer Gene Expression Data, Benny Yin-ming Fung, Vincent
To-yee Ng, Hong Kong Polytechnic University.
- 2:00-2:30 (long) Bayesian Model-Averaging in
Unsupervised Learning From Microarray Data, Mario Medvedovic,
Junhai Guo, University of Cincinnati.
- 2:30-2:50 (short) Clustering Labeled Data and
Cross-Validation for Classification with Few Positives in
Yeast, Miles Trochesset, Anthony Bonner, Univ. of
Toronto.
- 2:50-3:10 (short) A Maximum Entropy Approach to
Biomedical Named Entity Recognition, Yi-Feng Lin, Tzong-Han
Tsai, Wen-Chi Chou, Kuen-Pin Wu, Ting-Yi Sung, Wen-Lian Hsu,
IIS, Academia Sinica.
3:10-3:30 Break 3:30-4:30 Session IV (Chair:
Vincent Ng)
- 3:30-4:00 (long) Discovering Spatial Relationships
Between Approximately Equivalent Patterns in Contact
Maps, Hui Yang, Keith Marsolo, Srinivasan Parthasarathy,
Sameep Mehtas, The Ohio State University.
- 4:00-4:30 (long) Differential Association Rule Mining for
the Study of Protein-Protein Interaction Networks,
Christopher Besemann, Anne Denton, Ajay Yekkirala, Ron
Hutchison, Marc Anderson, North Dakota State
University.
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WORKSHOP CO-CHAIRS:
- Mohammed J. Zaki, Rensselaer Polytechnic Institute
- Shinichi Morishita, University of Tokyo
- Isidore Rigoutsos, IBM T.J. Watson Research Center
PROGRAM COMMITTEE:
- Srinivas Aluru,
Iowa
State University
- Alberto Apostolico, Prudue U., USA
- Tatsuya Akutsu, Kyoto U., Japan
- Charles Elkan, UC San Diego, USA
- Jayant Haritsa, Indian Inst. of Science, India
- Hasan Jamil,
Mississippi State University
- Andreas Karwath, U. Freiburg, Germany
- George Karypis,
University of Minnesota
- Ross D. King,
University of Wales, UK
- Jinyan Li, Inst. for Infocomm Research, Singapore
- Lance A. Liotta, NIH/NCI, USA
- Ambuj Singh, UC Santa Barbara, USA
- David Page, U. Wisconsin, USA
- Srini Parthasarathy,
Ohio State University
- Jignesh M. Patel, U. Michigan, USA
- Daniel E. Platt, IBM TJ Watson, USA
- Luc De Raedt,
Albert-Ludwigs University, Germany
- Tobias Scheffer,Otto-von-Guericke
University, Germany
- Karlton Sequeira, RPI, USA
- Hannu Toivonen, U. Helsinki, Finland
- Jason Wang, NJIT, USA
- Wei Wang, UNC Chapel-hill, USA
- Jiong Yang, Case Western
Reserve U, USA
- Aidong Zhang, U. Buffalo, USA
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