Phd Students

Main.PhdStudents History

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August 25, 2011, at 02:45 PM by 128.113.126.13 -
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!!!!!![[http://www.cs.rpi.edu/~yildih2/ | Hilmi Yildrim]]
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!!!!!![[http://www.rpi.edu/~lig2/ | Geng Li]]
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!!!!!![[http://www.rpi.edu/~lig2/ | Geng Li]]

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!!!!!![[http://www.cs.rpi.edu/~yildih2/ | Hilmi Yildrim]]
'''Graduation date''': August 2011 \\
'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/yildirim.pdf | Scalable Reachability Indexing for Very Large Graphs (PDF)]] \\
'''Employment''': Google, Inc.
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August 02, 2010, at 07:41 AM by 128.113.126.13 -
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'''Employment''': eBay Research Labs
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'''Employment''': Assistant Professor, Department of Computer & Information Science, Indiana University Purdue University Indianapolis
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August 25, 2009, at 12:00 PM by 128.213.6.8 -
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!!!Current Students
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!!!Current PhD Students
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!!!Past Students
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!!!Past PhD Students
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August 25, 2009, at 11:59 AM by 128.213.6.8 -
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'''Thesis title''': Efficient Algorithms for Mining Arbitrary Shaped Clusters \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/chaoji.pdf | Efficient Algorithms for Mining Arbitrary Shaped Clusters (PDF)]] \\
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'''Thesis title''': Mining Interesting Subgraphs by Output Space Sampling \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/hasan.pdf | Mining Interesting Subgraphs by Output Space Sampling (PDF)]] \\
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'''Thesis title''': Non-Sequential and Flexible Protein Structure Alignment \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/salem.pdf | Non-Sequential and Flexible Protein Structure Alignment (PDF)]] \\
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'''Thesis title''': Trellis: Genome-scale Disk-based Suffix Tree Indexing Algorithm \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/phoophakdee.pdf | Trellis: Genome-scale Disk-based Suffix Tree Indexing Algorithm (PDF)]] \\
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'''Thesis title''': Indexing Methods for Protein Tertiary and Predicted Structures \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/gao.pdf | Indexing Methods for Protein Tertiary and Predicted Structures (PDF)]]\\
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'''Thesis title''': Context Shapes: A Novel Approach for Partial Complementary Shape Matching Proteins \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/shentu.pdf | Context Shapes: A Novel Approach for Partial Complementary Shape Matching Proteins (PDF)]]\\
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'''Thesis title''': Mining Subspace and Boolean Patterns from Data \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/zhao.pdf | Mining Subspace and Boolean Patterns from Data (PDF)]] \\
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'''Thesis title''': Structured Motifs in Biological Sequences: Search and Extraction \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/zhang.pdf | Structured Motifs in Biological Sequences: Search and Extraction (PDF)]]\\
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'''Thesis title''': VOGUE: A Novel Variable Order-Gap State Machine For Modeling Sequences \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/bouqata.pdf | VOGUE: A Novel Variable Order-Gap State Machine For Modeling Sequences (PDF)]]\\
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'''Thesis title''': Exploring similarities in high-dimensional datasets \\
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'''Thesis title''': [[Path:/~zaki/PaperDir/PhdTheses/sequeira.pdf | Exploring similarities in high-dimensional datasets (PDF)]]\\
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August 16, 2009, at 06:10 PM by 128.213.6.8 -
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August 16, 2009, at 06:09 PM by 128.213.6.8 -
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'''Graduation date'': August 2005 \\
'''Thesis title'': Exploring similarities in high-dimensional datasets \\
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'''Graduation date''': August 2005 \\
'''Thesis title''': Exploring similarities in high-dimensional datasets \\
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August 16, 2009, at 06:09 PM by 128.213.6.8 -
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August 15, 2009, at 08:17 PM by 128.213.6.8 -
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August 15, 2009, at 08:16 PM by 128.213.6.8 -
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August 13, 2009, at 12:21 AM by 128.213.6.8 -
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!!PhD Students
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August 13, 2009, at 12:17 AM by 128.213.6.8 -
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'''Thesis title''': Protein Structural Similarity \\
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'''Thesis title''': Non-Sequential and Flexible Protein Structure Alignment \\
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August 13, 2009, at 12:15 AM by 128.213.6.8 -
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!!PhD Students
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!!!Current Students

!!!!!![[http://www.cs.rpi.edu/~yildih2/ | Hilmi Yildrim]]

!!!!!![[http://www.rpi.edu/~lig2/ | Geng Li]]

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!!!Past Students

!!!!!![[http://www.cs.rpi.edu/~chaojv/ | Vineet Chaoji]]

'''Graduation date''': August 2009 \\
'''Thesis title''': Efficient Algorithms for Mining Arbitrary Shaped Clusters \\
'''Employment''': Yahoo! Research Labs, Bangalore, India

!!!!!![[http://www.cs.rpi.edu/~alhasan/ | Mohammad Al Hasan]]

'''Graduation date''': August 2009 \\
'''Thesis title''': Mining Interesting Subgraphs by Output Space Sampling \\
'''Employment''': eBay Research Labs


!!!!!![[http://www.cs.ndsu.nodak.edu/ | Saeed Salem]]

'''Graduation date''': August 2009 \\
'''Thesis title''': Protein Structural Similarity \\
'''Employment''': Assistant Professor, Computer Science Department, North Dakota State University

!!!!!![[http://www.linkedin.com/pub/benjarath-pupacdi/7/170/273 | Benjarath Phoophakdee]]

'''Graduation date''': August 2007 \\
'''Thesis title''': Trellis: Genome-scale Disk-based Suffix Tree Indexing Algorithm \\
'''Employment''': Chulabhorn Research Institute, Thailand

!!!!!![[http://www.linkedin.com/pub/feng-gao/2/98a/93 | Feng Gao]]

'''Graduation date''': December 2006 \\
'''Thesis title''': Indexing Methods for Protein Tertiary and Predicted Structures \\
'''Employment''': Microsoft

!!!!!![[http://www.linkedin.com/pub/zujun-shentu/4/6b1/50a | Zujun Shentu]]

'''Graduation date''': October 2006 \\
'''Thesis title''': Context Shapes: A Novel Approach for Partial Complementary Shape Matching Proteins \\
'''Employment''': Oracle

!!!!!!Lizhuang Zhao

'''Graduation date''': September 2006 \\
'''Thesis title''': Mining Subspace and Boolean Patterns from Data \\
'''Employment''': Amazon

!!!!!![[http://www.cs.rpi.edu/~zhangy0/ | Yongqiang Zhang]]

'''Graduation date''': August 2006 \\
'''Thesis title''': Structured Motifs in Biological Sequences: Search and Extraction \\
'''Employment''': Oracle

!!!!!![[http://www.linkedin.com/pub/bouchra-bouqata/5/773/715 | Bouchra Bouqata]]

'''Graduation date''': August 2006 \\
'''Thesis title''': VOGUE: A Novel Variable Order-Gap State Machine For Modeling Sequences \\
'''Co-Advisors''': Christopher Carothers, Boleslaw Szymanski, Mohammed J. Zaki\\
'''Employment''': GE Center for Research and Development


!!!!!![[http://www.cs.rpi.edu/~sequek/ | Karlton Sequeira]]

'''Graduation date'': August 2005 \\
'''Thesis title'': Exploring similarities in high-dimensional datasets \\
'''Employment''': Amazon
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